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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs150581274 chr9:72022540 G/A 5.78E-11 479 15.77 16.58 8.83 KM Plot
THCA rs150604086 chr1:16191545 CTTAATT/C 0.000183 488 15.27 17.13 17.77 KM Plot
THCA rs150666519 chr2:48109582 T/TC 4.98E-8 488 15.17 19.47 8.27 KM Plot
THCA rs150689809 chr6:86409405 G/T 2.34E-5 481 16.2 13.7 31.9 KM Plot
THCA rs150704348 chr7:76416201 T/C 2.05E-8 481 15.33 17.03 15.67 KM Plot
THCA rs1507148 chr6:79554391 A/G 5.36E-5 490 23.63 17.65 15.63 KM Plot
THCA rs1507150 chr6:79548597 A/T 5.48E-6 490 18.8 16.37 15.7 KM Plot
THCA rs1507156 chr6:79498057 G/A 1.46E-6 489 18.8 17.7 15.65 KM Plot
THCA rs150717082 chr6:24406629 TTAAA/T 4.55E-15 490 16.38 14.8 11.07 KM Plot
THCA rs150742735 chr10:81613249 G/A 0 474 15.93 15.98 5.92 KM Plot
THCA rs150744069 chr19:43547843 C/A 5.85E-5 487 15.32 17.77 10.08 KM Plot
THCA rs150762217 chr5:116162927 A/C 3.3E-8 487 15.87 15.62 21.67 KM Plot
THCA rs150766093 chr13:46466103 A/AATTCCATCTTGTCAAAAAAAG 8.44E-6 486 15.7 17.03 13.1 KM Plot
THCA rs150857297 chr1:41671734 TAGATAAAACCACAAA/T 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs150867519 chr1:91754485 C/T 8.35E-6 486 15.65 17.03 17.77 KM Plot